STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UY63_CAPTEUncharacterized protein. (903 aa)    
Predicted Functional Partners:
R7US78_CAPTE
Uncharacterized protein.
   
 0.941
R7UT32_CAPTE
Uncharacterized protein.
   
0.941
R7TTC4_CAPTE
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
   0.883
R7T569_CAPTE
Uncharacterized protein.
   
 0.877
R7UVB6_CAPTE
Uncharacterized protein.
   
 0.877
R7U230_CAPTE
Uncharacterized protein.
    
   0.843
R7UMR1_CAPTE
Uncharacterized protein.
    
 0.739
R7TEX6_CAPTE
DUF2013 domain-containing protein.
    
 
 0.702
R7U007_CAPTE
Non-specific serine/threonine protein kinase.
    
  0.681
R7UJS3_CAPTE
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.681
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.