STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7UYX6_CAPTEUncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (384 aa)    
Predicted Functional Partners:
R7U9U2_CAPTE
Uncharacterized protein.
  
  
 0.948
R7TL03_CAPTE
Uncharacterized protein.
  
    0.877
R7TPT3_CAPTE
Uncharacterized protein.
  
    0.877
R7TXQ3_CAPTE
Uncharacterized protein.
  
 0.836
R7U8S1_CAPTE
S1 motif domain-containing protein.
  
 0.836
R7TTB4_CAPTE
Str_synth domain-containing protein.
  
 0.834
R7UD09_CAPTE
Str_synth domain-containing protein.
  
 0.834
R7UR83_CAPTE
Uncharacterized protein.
    
  0.781
R7TKB4_CAPTE
Uncharacterized protein.
    
 
 0.737
R7TX22_CAPTE
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.
  
 0.725
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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