STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7V2B0_CAPTEUncharacterized protein. (494 aa)    
Predicted Functional Partners:
R7UNG7_CAPTE
Uncharacterized protein.
    
 0.984
R7VDN3_CAPTE
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
   0.937
R7VGF2_CAPTE
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.933
R7UVZ1_CAPTE
Uncharacterized protein.
   
 
 0.924
R7TLM3_CAPTE
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 
 0.922
R7TJM9_CAPTE
PX domain-containing protein.
   
 0.886
R7TM72_CAPTE
PX domain-containing protein.
   
 0.858
R7TMH8_CAPTE
Uncharacterized protein.
   
 0.858
R7TM15_CAPTE
Uncharacterized protein.
    
 0.783
R7TKR8_CAPTE
Uncharacterized protein.
    
 0.739
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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