STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7V2F3_CAPTEAA_TRNA_LIGASE_II domain-containing protein. (315 aa)    
Predicted Functional Partners:
R7TL42_CAPTE
Uncharacterized protein.
 
 0.985
R7U1P8_CAPTE
B5 domain-containing protein.
  
 0.978
R7TQ29_CAPTE
B3_4 domain-containing protein.
  
 0.968
R7TM42_CAPTE
AA_TRNA_LIGASE_II domain-containing protein.
   
 
0.830
R7V235_CAPTE
Tyrosine--tRNA ligase.
  
 
 0.826
R7U613_CAPTE
Uncharacterized protein.
  
  
 0.768
R7V7B0_CAPTE
Uncharacterized protein.
     
 0.758
R7TXE8_CAPTE
Ribosomal_L16 domain-containing protein.
  
 
 0.722
R7T4H4_CAPTE
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.700
R7V6M9_CAPTE
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.695
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.