STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7V302_CAPTELipid_DES domain-containing protein; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily. (325 aa)    
Predicted Functional Partners:
R7V129_CAPTE
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
 
      0.877
R7TXE2_CAPTE
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.846
R7U1R5_CAPTE
DAGKc domain-containing protein.
    
 0.845
R7UQH3_CAPTE
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.844
R7VIR9_CAPTE
SAM domain-containing protein.
   
 
 0.843
R7U7A6_CAPTE
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
 
      0.823
R7T7I2_CAPTE
TLC domain-containing protein.
   
 0.811
R7UWV7_CAPTE
TLC domain-containing protein.
   
 0.811
R7TVD6_CAPTE
DAGKc domain-containing protein.
    
 0.805
R7TAT3_CAPTE
acidPPc domain-containing protein.
     
 0.803
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.