STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7V3X1_CAPTEUncharacterized protein. (534 aa)    
Predicted Functional Partners:
R7TIP4_CAPTE
WD_REPEATS_REGION domain-containing protein.
   
 0.836
R7THZ5_CAPTE
Ipi1_N domain-containing protein.
   
 0.818
R7U3M9_CAPTE
MAM domain-containing protein.
   
  0.788
R7UNK6_CAPTE
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.778
R7VCM4_CAPTE
Uncharacterized protein.
   
 0.721
R7TRB8_CAPTE
WD_REPEATS_REGION domain-containing protein.
   
  0.720
R7TP63_CAPTE
CLP1_P domain-containing protein.
   
 0.689
R7TUB6_CAPTE
Uncharacterized protein.
   
 0.686
R7TBS4_CAPTE
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
  0.663
R7VEH4_CAPTE
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.596
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.