STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7V4B3_CAPTERNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (177 aa)    
Predicted Functional Partners:
R7TJJ7_CAPTE
Uncharacterized protein.
   
 0.998
R7UNB6_CAPTE
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.996
R7U247_CAPTE
Btz domain-containing protein.
   
 0.995
R7VLY4_CAPTE
Mago-bind domain-containing protein.
    
 0.995
R7TK89_CAPTE
Uncharacterized protein.
   
 0.990
R7TFE2_CAPTE
RRM domain-containing protein.
   
 0.989
R7UP31_CAPTE
Uncharacterized protein.
    
 0.989
R7TMG9_CAPTE
Smg4_UPF3 domain-containing protein.
    
 0.988
R7TZ80_CAPTE
Uncharacterized protein.
   
  0.987
R7TRZ9_CAPTE
Nuclear cap-binding protein subunit 2.
   
 0.986
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.