STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7V887_CAPTEUncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (464 aa)    
Predicted Functional Partners:
R7TPS8_CAPTE
Serine--pyruvate aminotransferase.
  
 0.874
R7UG84_CAPTE
Serine--pyruvate aminotransferase.
  
 0.874
R7TSW8_CAPTE
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
 
 0.869
R7TXF6_CAPTE
SDH_beta domain-containing protein.
  
 
 0.842
R7T3V4_CAPTE
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.826
R7UQJ2_CAPTE
Aminotran_1_2 domain-containing protein.
   
 0.818
R7UJH9_CAPTE
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
 
 0.811
R7VKE7_CAPTE
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.810
R7TNM3_CAPTE
Aldedh domain-containing protein.
 
 
 
 0.790
R7TCF7_CAPTE
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
0.788
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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