STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7V8F2_CAPTELongin domain-containing protein; Belongs to the synaptobrevin family. (309 aa)    
Predicted Functional Partners:
R7UUE2_CAPTE
t-SNARE coiled-coil homology domain-containing protein.
   
 0.990
R7TL43_CAPTE
Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.989
R7V229_CAPTE
t-SNARE coiled-coil homology domain-containing protein.
   
 0.987
R7U651_CAPTE
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.986
R7UY61_CAPTE
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.985
R7U537_CAPTE
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.984
R7URB9_CAPTE
Uncharacterized protein.
    
 0.983
N1PB12_CAPTE
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.982
R7U2Z7_CAPTE
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.981
R7VBQ0_CAPTE
Syntaxin-5_N domain-containing protein.
   
 0.981
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.