STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7VDY8_CAPTEUncharacterized protein. (224 aa)    
Predicted Functional Partners:
R7UL95_CAPTE
Matrin-type domain-containing protein.
    
 0.985
R7UWQ1_CAPTE
Uncharacterized protein.
   
 0.982
R7T9C4_CAPTE
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
   
 0.978
R7UMA6_CAPTE
PSP domain-containing protein.
   
 0.977
R7TX32_CAPTE
CPSF_A domain-containing protein.
   
 0.976
R7UC00_CAPTE
Uncharacterized protein.
    
 0.975
R7UHZ5_CAPTE
RRM domain-containing protein.
   
 0.972
R7UTD8_CAPTE
Small nuclear ribonucleoprotein G.
   
 0.971
R7U4U2_CAPTE
Small nuclear ribonucleoprotein Sm D2.
   
 0.970
R7TA38_CAPTE
Small nuclear ribonucleoprotein Sm D3.
   
 0.969
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.