STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R7VM22_CAPTELRRcap domain-containing protein. (253 aa)    
Predicted Functional Partners:
R7UL95_CAPTE
Matrin-type domain-containing protein.
   
 0.998
R7UC00_CAPTE
Uncharacterized protein.
   
 0.997
R7V5B5_CAPTE
Uncharacterized protein.
   
 0.997
R7UUX4_CAPTE
Uncharacterized protein.
   
 0.996
R7TA38_CAPTE
Small nuclear ribonucleoprotein Sm D3.
   
 0.995
R7U4U2_CAPTE
Small nuclear ribonucleoprotein Sm D2.
   
 0.994
R7UI09_CAPTE
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.994
R7UMA6_CAPTE
PSP domain-containing protein.
   
 0.994
R7UTD8_CAPTE
Small nuclear ribonucleoprotein G.
   
 0.994
R7TX32_CAPTE
CPSF_A domain-containing protein.
    
 0.993
Your Current Organism:
Capitella teleta
NCBI taxonomy Id: 283909
Other names: C. teleta, Capitella sp. I, Capitella sp. I AF-2005, Capitella sp. I ECS-2004, Capitella sp. I ES-2005, Capitella sp. MKJ-2016, Capitella teleta Blake, Grassle & Eckelbarger, 2009
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.