STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0186Nitric oxide reductase large subunit. (746 aa)    
Predicted Functional Partners:
IL0762
Copper-containing nitrite reductase.
 
  
 0.964
cyoA
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 
 0.890
IL0761
Cytochrome c, monoheme variant.
  
 
 0.806
ccoP
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 
 0.806
IL0197
Probable regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
 
  
 0.762
IL0763
Secreted protein with uncharacterized domain; Possibly involved in signal transduction.
 
     0.585
IL0185
Uncharacterized conserved protein.
       0.583
narX
Nitrate/nitrite sensor histidine kinase.
 
   
 0.532
IL0194
Heme/copper membrane protein; Involved in nitrate/nitrite taxis.
 
  
 0.516
IL0188
Oxygen-sensitive ribonucleoside-triphosphate reductase.
 
     0.436
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis L2TR, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.