STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL0540ABC-type multidrug transport system, ATPase and permease components. (598 aa)    
Predicted Functional Partners:
rffG
DTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
       0.729
rffH
DTDP-glucose pyrophosphorylase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
       0.728
IL0539
Chain length determinant protein.
     
 0.603
ugd
UDP-glucose 6-dehydrogenase.
     
 0.589
dnaK
Molecular chaperone (HSP70); Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.580
IL0544
3-oxoacyl-(acyl carrier protein) reductase, putative.
 
 
  0.539
IL2404
ABC-type multidrug transport system, ATPase (two domains) and permease components.
  
0.499
IL0312
ABC-type multidrug transport system, ATPase component.
  
0.492
IL2259
ABC-type multidrug transport system, ATPase component.
 
0.482
arcC/arsR
ArsC/ArsR fusion protein; Transcriptional repressor of ars operon; Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.471
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis L2TR, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.