Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
IL0640 | alpA | IL0640 | IL0639 | Predicted transcriptional regulator; Similar to AlpA. | Prophage CP4-57 regulatory protein-like protein. | 0.521 |
IL0640 | intA | IL0640 | IL1654 | Predicted transcriptional regulator; Similar to AlpA. | Integrase; Belongs to the 'phage' integrase family. | 0.672 |
IL0640 | intB | IL0640 | IL0651 | Predicted transcriptional regulator; Similar to AlpA. | Integrase; Belongs to the 'phage' integrase family. | 0.672 |
alpA | IL0640 | IL0639 | IL0640 | Prophage CP4-57 regulatory protein-like protein. | Predicted transcriptional regulator; Similar to AlpA. | 0.521 |
alpA | intA | IL0639 | IL1654 | Prophage CP4-57 regulatory protein-like protein. | Integrase; Belongs to the 'phage' integrase family. | 0.667 |
alpA | intB | IL0639 | IL0651 | Prophage CP4-57 regulatory protein-like protein. | Integrase; Belongs to the 'phage' integrase family. | 0.684 |
intA | IL0640 | IL1654 | IL0640 | Integrase; Belongs to the 'phage' integrase family. | Predicted transcriptional regulator; Similar to AlpA. | 0.672 |
intA | alpA | IL1654 | IL0639 | Integrase; Belongs to the 'phage' integrase family. | Prophage CP4-57 regulatory protein-like protein. | 0.667 |
intB | IL0640 | IL0651 | IL0640 | Integrase; Belongs to the 'phage' integrase family. | Predicted transcriptional regulator; Similar to AlpA. | 0.672 |
intB | alpA | IL0651 | IL0639 | Integrase; Belongs to the 'phage' integrase family. | Prophage CP4-57 regulatory protein-like protein. | 0.684 |