Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
IL0856 | IL0857 | Aminopeptidase N family protein, contains PDZ domain. | Signaling protein with a sensor domain and GGDEF domain. | 0.523 |
IL0856 | IL0858 | Aminopeptidase N family protein, contains PDZ domain. | Protein containing a predicted nucleotide-binding domain of Rossmann fold. | 0.421 |
IL0856 | IL0859 | Aminopeptidase N family protein, contains PDZ domain. | SmpA /OmlA family lipoprotein. | 0.418 |
IL0856 | IL0860 | Aminopeptidase N family protein, contains PDZ domain. | Hypothetical protein. | 0.418 |
IL0857 | IL0856 | Signaling protein with a sensor domain and GGDEF domain. | Aminopeptidase N family protein, contains PDZ domain. | 0.523 |
IL0857 | IL0858 | Signaling protein with a sensor domain and GGDEF domain. | Protein containing a predicted nucleotide-binding domain of Rossmann fold. | 0.571 |
IL0857 | IL0859 | Signaling protein with a sensor domain and GGDEF domain. | SmpA /OmlA family lipoprotein. | 0.563 |
IL0857 | IL0860 | Signaling protein with a sensor domain and GGDEF domain. | Hypothetical protein. | 0.563 |
IL0858 | IL0856 | Protein containing a predicted nucleotide-binding domain of Rossmann fold. | Aminopeptidase N family protein, contains PDZ domain. | 0.421 |
IL0858 | IL0857 | Protein containing a predicted nucleotide-binding domain of Rossmann fold. | Signaling protein with a sensor domain and GGDEF domain. | 0.571 |
IL0858 | IL0859 | Protein containing a predicted nucleotide-binding domain of Rossmann fold. | SmpA /OmlA family lipoprotein. | 0.866 |
IL0858 | IL0860 | Protein containing a predicted nucleotide-binding domain of Rossmann fold. | Hypothetical protein. | 0.848 |
IL0858 | IL0861 | Protein containing a predicted nucleotide-binding domain of Rossmann fold. | Isocitrate dehydrogenase, NAD-dependent. | 0.586 |
IL0859 | IL0856 | SmpA /OmlA family lipoprotein. | Aminopeptidase N family protein, contains PDZ domain. | 0.418 |
IL0859 | IL0857 | SmpA /OmlA family lipoprotein. | Signaling protein with a sensor domain and GGDEF domain. | 0.563 |
IL0859 | IL0858 | SmpA /OmlA family lipoprotein. | Protein containing a predicted nucleotide-binding domain of Rossmann fold. | 0.866 |
IL0859 | IL0860 | SmpA /OmlA family lipoprotein. | Hypothetical protein. | 0.866 |
IL0859 | IL0861 | SmpA /OmlA family lipoprotein. | Isocitrate dehydrogenase, NAD-dependent. | 0.561 |
IL0860 | IL0856 | Hypothetical protein. | Aminopeptidase N family protein, contains PDZ domain. | 0.418 |
IL0860 | IL0857 | Hypothetical protein. | Signaling protein with a sensor domain and GGDEF domain. | 0.563 |
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