Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
IL0962 | IL0963 | IL0962 | IL0963 | Predicted extracellular metal-dependent peptidase. | NlpI-like lipoprotein; May be involved in cell division. | 0.861 |
IL0962 | pnp | IL0962 | IL0964 | Predicted extracellular metal-dependent peptidase. | Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.584 |
IL0963 | IL0962 | IL0963 | IL0962 | NlpI-like lipoprotein; May be involved in cell division. | Predicted extracellular metal-dependent peptidase. | 0.861 |
IL0963 | pnp | IL0963 | IL0964 | NlpI-like lipoprotein; May be involved in cell division. | Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.765 |
pnp | IL0962 | IL0964 | IL0962 | Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | Predicted extracellular metal-dependent peptidase. | 0.584 |
pnp | IL0963 | IL0964 | IL0963 | Polynucleotide phosphorylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | NlpI-like lipoprotein; May be involved in cell division. | 0.765 |