STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1267Predicted carboxypeptidase, Zn dependent. (375 aa)    
Predicted Functional Partners:
IL1268
Na(+)-linked D-alanine and glycine permease.
       0.783
IL1269
Zn-ribbon protein.
 
   
 0.615
gapC
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
       0.594
IL1270
Uncharacterized conserved protein.
     
 0.524
IL1272
Hypothetical protein.
       0.514
proQ
Activator of osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
       0.514
prc
Carboxyl-terminal protease, periplasmic; Belongs to the peptidase S41A family.
       0.508
IL1271
Signaling protein with a GAF domain.
       0.493
IL2317
Arginine N-succinyltransferase.
  
     0.444
pepN_1
Aminopeptidase N.
 
  
 0.432
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis L2TR, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.