STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJK40402.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)    
Predicted Functional Partners:
KJK39730.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.985
KJK40401.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.975
KJK33097.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.941
KJK34540.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.898
KJK39869.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.894
KJK37029.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.889
KJK41525.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.871
KJK38262.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.866
KJK40405.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.865
KJK39663.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.859
Your Current Organism:
Streptomyces variegatus
NCBI taxonomy Id: 284040
Other names: ATCC 43696, DSM 41464, IFO 15462, INA T-511, JCM 6930, LMG 20315, LMG:20315, NBRC 15462, S. variegatus, VKM Ac-846
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.