STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJK40078.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)    
Predicted Functional Partners:
KJK39967.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.947
KJK39968.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.891
KJK41607.1
Rod shape-determining protein MreD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
KJK41345.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.732
KJK38958.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
KJK37563.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.706
KJK39966.1
NYN domain containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.703
KJK35336.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.700
KJK37564.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.678
KJK39598.1
Biotin transporter BioY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.669
Your Current Organism:
Streptomyces variegatus
NCBI taxonomy Id: 284040
Other names: ATCC 43696, DSM 41464, IFO 15462, INA T-511, JCM 6930, LMG 20315, LMG:20315, NBRC 15462, S. variegatus, VKM Ac-846
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.