Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KJK38042.1 | KJK38043.1 | UK15_19425 | UK15_19430 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.642 |
KJK38042.1 | KJK40521.1 | UK15_19425 | UK15_05510 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.559 |
KJK38042.1 | mltG | UK15_19425 | UK15_19435 | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.529 |
KJK38043.1 | KJK38042.1 | UK15_19430 | UK15_19425 | Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.642 |
KJK38043.1 | mltG | UK15_19430 | UK15_19435 | Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.659 |
KJK40521.1 | KJK38042.1 | UK15_05510 | UK15_19425 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.559 |
mltG | KJK38042.1 | UK15_19435 | UK15_19425 | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.529 |
mltG | KJK38043.1 | UK15_19435 | UK15_19430 | Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.659 |