STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW01234.1Signal transduction histidine kinase. (516 aa)    
Predicted Functional Partners:
SDW96116.1
Signal transduction histidine kinase.
 
 
 0.731
SDX30598.1
PAS/PAC sensor signal transduction histidine kinase.
 
 
 0.713
SDW56845.1
PAS domain S-box-containing protein.
  
 
 0.696
cheB
Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
   
 0.686
SDW50850.1
PAS domain S-box-containing protein.
  
 
 0.680
SDW28211.1
PAS domain S-box-containing protein.
  
 
 0.669
SDW94754.1
HalX domain-containing protein.
  
 
 0.666
SDW28546.1
PAS domain S-box-containing protein.
 
 
 0.664
SDW91751.1
Response regulator receiver domain-containing protein.
  
 
 0.660
SDW08512.1
HalX domain-containing protein.
  
 
 0.659
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
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