STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW01445.1Hypothetical protein. (221 aa)    
Predicted Functional Partners:
SDW01378.1
Precorrin-3 methyltransferase.
       0.810
SDW01407.1
Precorrin-3 methyltransferase.
       0.810
SDW01427.1
Ferredoxin.
       0.810
SDW01466.1
Sirohydrochlorin ferrochelatase.
       0.810
SDW01490.1
Protein of unknown function.
       0.739
SDW01512.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
       0.739
SDW01253.1
cobalt-precorrin-6B (C15)-methyltransferase.
       0.466
SDW01278.1
Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase.
       0.466
SDW01301.1
Precorrin-4 C11-methyltransferase.
       0.466
SDW01327.1
Cobalt-precorrin 5A hydrolase.
       0.466
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.