Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW51158.1 | SDW51191.1 | SAMN05443574_10474 | SAMN05443574_10475 | Isochorismate synthase. | Hypothetical protein. | 0.531 |
SDW51158.1 | SDW51216.1 | SAMN05443574_10474 | SAMN05443574_10476 | Isochorismate synthase. | Hypothetical protein. | 0.439 |
SDW51158.1 | menD | SAMN05443574_10474 | SAMN05443574_10473 | Isochorismate synthase. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). | 0.999 |
SDW51191.1 | SDW51158.1 | SAMN05443574_10475 | SAMN05443574_10474 | Hypothetical protein. | Isochorismate synthase. | 0.531 |
SDW51191.1 | SDW51216.1 | SAMN05443574_10475 | SAMN05443574_10476 | Hypothetical protein. | Hypothetical protein. | 0.692 |
SDW51191.1 | menD | SAMN05443574_10475 | SAMN05443574_10473 | Hypothetical protein. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). | 0.528 |
SDW51216.1 | SDW51158.1 | SAMN05443574_10476 | SAMN05443574_10474 | Hypothetical protein. | Isochorismate synthase. | 0.439 |
SDW51216.1 | SDW51191.1 | SAMN05443574_10476 | SAMN05443574_10475 | Hypothetical protein. | Hypothetical protein. | 0.692 |
SDW51216.1 | menD | SAMN05443574_10476 | SAMN05443574_10473 | Hypothetical protein. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). | 0.427 |
menD | SDW51158.1 | SAMN05443574_10473 | SAMN05443574_10474 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). | Isochorismate synthase. | 0.999 |
menD | SDW51191.1 | SAMN05443574_10473 | SAMN05443574_10475 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). | Hypothetical protein. | 0.528 |
menD | SDW51216.1 | SAMN05443574_10473 | SAMN05443574_10476 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). | Hypothetical protein. | 0.427 |