STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW63388.1Precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase. (215 aa)    
Predicted Functional Partners:
SDW02949.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 
 0.996
SDX19907.1
Sirohydrochlorin cobaltochelatase.
  
 
 0.984
SDW01278.1
Precorrin-2 C20-methyltransferase /cobalt-factor II C20-methyltransferase.
    
 0.964
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
  
 0.934
SDW63414.1
Transcriptional regulator, AsnC family.
 
  
 0.903
SDW01301.1
Precorrin-4 C11-methyltransferase.
 
  
 0.890
SDW02971.1
uroporphyrinogen-III synthase.
 
 
 0.882
SDW01745.1
Sirohydrochlorin ferrochelatase.
  
 
 0.879
SDW02925.1
Hydroxymethylbilane synthase.
 
 
 0.829
SDW01327.1
Cobalt-precorrin 5A hydrolase.
    
 0.811
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
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