Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW39450.1 | SDW65977.1 | SAMN05443574_10376 | SAMN05443574_105230 | Ribonuclease R. | Uncharacterized protein. | 0.561 |
SDW39450.1 | rnj | SAMN05443574_10376 | SAMN05443574_10636 | Ribonuclease R. | Ribonuclease J; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily. | 0.470 |
SDW39450.1 | rps15 | SAMN05443574_10376 | SAMN05443574_112112 | Ribonuclease R. | SSU ribosomal protein S15P. | 0.719 |
SDW54933.1 | SDW65977.1 | SAMN05443574_104204 | SAMN05443574_105230 | Nicotinamide-nucleotide amidase. | Uncharacterized protein. | 0.570 |
SDW54933.1 | surE | SAMN05443574_104204 | SAMN05443574_11079 | Nicotinamide-nucleotide amidase. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.941 |
SDW65977.1 | SDW39450.1 | SAMN05443574_105230 | SAMN05443574_10376 | Uncharacterized protein. | Ribonuclease R. | 0.561 |
SDW65977.1 | SDW54933.1 | SAMN05443574_105230 | SAMN05443574_104204 | Uncharacterized protein. | Nicotinamide-nucleotide amidase. | 0.570 |
SDW65977.1 | SDX03879.1 | SAMN05443574_105230 | SAMN05443574_11296 | Uncharacterized protein. | Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase. | 0.471 |
SDW65977.1 | SDX19705.1 | SAMN05443574_105230 | SAMN05443574_1183 | Uncharacterized protein. | Molybdopterin molybdochelatase. | 0.495 |
SDW65977.1 | SDX24422.1 | SAMN05443574_105230 | SAMN05443574_12129 | Uncharacterized protein. | GTP cyclohydrolase I. | 0.658 |
SDW65977.1 | mobA | SAMN05443574_105230 | SAMN05443574_114108 | Uncharacterized protein. | Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. | 0.558 |
SDW65977.1 | ndk | SAMN05443574_105230 | SAMN05443574_10660 | Uncharacterized protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 0.605 |
SDW65977.1 | rnj | SAMN05443574_105230 | SAMN05443574_10636 | Uncharacterized protein. | Ribonuclease J; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily. | 0.617 |
SDW65977.1 | rps15 | SAMN05443574_105230 | SAMN05443574_112112 | Uncharacterized protein. | SSU ribosomal protein S15P. | 0.505 |
SDW65977.1 | surE | SAMN05443574_105230 | SAMN05443574_11079 | Uncharacterized protein. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.550 |
SDX03879.1 | SDW65977.1 | SAMN05443574_11296 | SAMN05443574_105230 | Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase. | Uncharacterized protein. | 0.471 |
SDX19705.1 | SDW65977.1 | SAMN05443574_1183 | SAMN05443574_105230 | Molybdopterin molybdochelatase. | Uncharacterized protein. | 0.495 |
SDX19705.1 | mobA | SAMN05443574_1183 | SAMN05443574_114108 | Molybdopterin molybdochelatase. | Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. | 0.975 |
SDX24422.1 | SDW65977.1 | SAMN05443574_12129 | SAMN05443574_105230 | GTP cyclohydrolase I. | Uncharacterized protein. | 0.658 |
SDX24422.1 | ndk | SAMN05443574_12129 | SAMN05443574_10660 | GTP cyclohydrolase I. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 0.716 |
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