STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW76833.1Iron-sulfur cluster assembly protein. (124 aa)    
Predicted Functional Partners:
SDW03254.1
Nitrogen fixation protein NifU.
  
  
 0.973
SDX11044.1
Monothiol glutaredoxin.
 
 0.892
SDW38337.1
Uncharacterized conserved protein.
  
 
 0.802
SDW66183.1
Fe-S cluster assembly ATP-binding protein.
  
 
 0.752
dnaK
Molecular chaperone DnaK; Acts as a chaperone.
  
 
 0.742
SDW02853.1
Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain.
  
 
 0.716
SDW40562.1
Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain.
  
 
 0.716
SDW66138.1
Iron-regulated ABC transporter permease protein SufD.
  
 
 0.710
SDW66157.1
Iron-regulated ABC transporter membrane component SufB.
  
 
 0.710
SDX30797.1
Serine O-acetyltransferase.
     
 0.658
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.