STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW72114.1Electron transfer flavoprotein-quinone oxidoreductase. (553 aa)    
Predicted Functional Partners:
SDW04328.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.999
SDW04362.1
Electron transfer flavoprotein beta subunit.
 
 0.999
SDW72060.1
Electron transfer flavoprotein beta subunit.
 
 0.999
SDW72086.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.999
SDW72144.1
Hypothetical protein.
       0.857
SDW54136.1
2,3-di-O-geranylgeranylglyceryl phosphate reductase.
 
 
 0.854
SDW55822.1
2,3-di-O-geranylgeranylglyceryl phosphate reductase.
 
 
 0.846
SDW94411.1
Electron-transferring-flavoprotein dehydrogenase.
 
 
 0.825
SDW72027.1
NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
 
   
 0.819
SDW04291.1
Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.796
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.