STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW87091.1Xanthine dehydrogenase, molybdenum binding subunit apoprotein. (815 aa)    
Predicted Functional Partners:
SDW87065.1
Carbon-monoxide dehydrogenase small subunit.
 0.999
SDW87118.1
Carbon-monoxide dehydrogenase small subunit.
 0.998
SDW87241.1
Xanthine dehydrogenase accessory factor.
 
 
 0.927
SDW87340.1
Molybdenum cofactor cytidylyltransferase.
 
  
 0.813
SDW51803.1
Carbon monoxide dehydrogenase subunit G.
    
 0.596
SDW72027.1
NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
    
 0.561
SDW87314.1
Probable selenium-dependent hydroxylase accessory protein YqeC.
  
     0.552
pyrD
Dihydroorotate oxidase A /dihydroorotate oxidase B, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
    
 0.548
SDX19705.1
Molybdopterin molybdochelatase.
     
 0.543
SDW87141.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
    
0.507
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
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