STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW89631.1Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. (276 aa)    
Predicted Functional Partners:
SDW89600.1
Prokaryotic molybdopterin-containing oxidoreductase family, molybdopterin binding subunit.
 0.999
SDW89647.1
Prokaryotic molybdopterin-containing oxidoreductase family, membrane subunit.
 
 0.999
SDX10598.1
Formate dehydrogenase alpha subunit.
 
 0.963
SDW85671.1
Formate dehydrogenase major subunit.
  
 0.923
SDX06791.1
Formate dehydrogenase major subunit.
 
 0.923
SDW32101.1
Assimilatory nitrate reductase (ferredoxin) precursor.
  
 0.922
SDW89671.1
Chaperone TorD involved in molybdoenzyme TorA maturation.
 
     0.891
SDX10854.1
Aldehyde:ferredoxin oxidoreductase.
 
 0.883
SDW39654.1
Aldehyde:ferredoxin oxidoreductase.
 
 0.882
SDX10614.1
4Fe-4S dicluster domain-containing protein.
 
  
 0.812
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
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