STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW89924.1Menaquinol-cytochrome c reductase cytochrome b subunit precursor. (471 aa)    
Predicted Functional Partners:
SDW25670.1
Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
SDW40919.1
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D.
   
 
 0.999
SDX03697.1
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D.
   
 
 0.999
SDW89943.1
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor.
 
 0.997
SDX03540.1
NADH dehydrogenase subunit M.
  
 
 0.967
SDX03670.1
NADH dehydrogenase subunit H.
   
 
 0.963
SDW11519.1
Rieske [2Fe-2S] domain-containing protein.
  
 0.959
SDW53882.1
Rieske [2Fe-2S] domain-containing protein.
  
 0.959
SDX20077.1
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 0.956
SDW91058.1
Cytochrome c oxidase subunit 2.
 
 0.955
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
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