STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW91543.1Thioredoxin reductase (NADPH). (349 aa)    
Predicted Functional Partners:
SDW38940.1
Adenylyltransferase and sulfurtransferase.
  
  
 0.704
SDX14223.1
Thioredoxin.
 
 
 0.703
SDW86505.1
Hypothetical protein.
  
  
  0.667
SDW03334.1
Cysteine desulfurase.
  
 
  0.662
SDW91525.1
Hypothetical protein.
       0.653
SDX16378.1
Thioredoxin reductase (NADPH).
  
  
 
0.650
SDW14878.1
FAD binding domain-containing protein.
  
  
 
0.647
SDW91572.1
Hypothetical protein.
       0.613
SDX07107.1
Thioredoxin.
 
 
 0.603
SDW27185.1
Cystathionine gamma-synthase.
   
 
 0.586
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.