STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX06593.1PAS domain S-box-containing protein. (955 aa)    
Predicted Functional Partners:
SDW57401.1
Methyl-accepting chemotaxis protein.
  
  
  0.618
SDX06642.1
Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
   0.558
SDW57332.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.555
SDX06619.1
Hypothetical protein.
       0.551
SDX13583.1
hydroxymethylglutaryl-CoA synthase.
  
     0.515
SDX38919.1
Thiosulfate dehydrogenase [quinone] large subunit.
  
     0.511
SDX09147.1
Hypothetical protein.
  
     0.505
SDW57026.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
  
  0.490
SDW42837.1
PAP2 superfamily protein.
  
   
 0.488
SDW27249.1
PAS domain S-box-containing protein.
 
  
0.476
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
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