STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX05763.1Glycosyltransferase involved in cell wall bisynthesis. (318 aa)    
Predicted Functional Partners:
SDX30236.1
Glycosyltransferase, GT2 family.
  
   
 0.604
SDX05782.1
Hypothetical protein.
       0.586
SDW06572.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  
 0.530
SDX05738.1
Sulfatase.
       0.513
SDX05804.1
(1->4)-alpha-D-glucan synthase (UDP-glucose).
 
 
  0.496
SDX05718.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.463
SDW67067.1
Hypothetical protein.
 
 
 0.406
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.