STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX11227.1NADH dehydrogenase. (58 aa)    
Predicted Functional Partners:
SDW40919.1
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D.
    
 0.703
SDX03697.1
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D.
    
 0.703
SDX03563.1
NADH dehydrogenase subunit L.
   
 
 0.605
SDX29922.1
NADH dehydrogenase.
 
      0.578
SDX19667.1
NADH dehydrogenase.
 
      0.576
SDX15510.1
NAD(P)H-quinone oxidoreductase subunit 5.
   
 
 0.499
SDX03652.1
NADH-quinone oxidoreductase subunit I.
   
 
 0.450
SDW89151.1
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD.
  
    0.443
SDX03586.1
NADH dehydrogenase subunit K.
   
 
 0.441
SDX03751.1
NADH dehydrogenase subunit A.
   
 
 0.435
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.