STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX13187.1beta-N-acetylhexosaminidase. (523 aa)    
Predicted Functional Partners:
SDW74155.1
Beta-glucosidase.
 
     0.911
SDW42043.1
CubicO group peptidase, beta-lactamase class C family.
 
 0.839
SDX13167.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
     
 0.569
SDX13140.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.568
SDX13120.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
   
 0.500
SDW91856.1
Beta-glucosidase.
  
  
 
0.499
SDW57320.1
Glucokinase.
    
 0.403
SDX05655.1
Carbohydrate binding module (family 6).
  
  
  0.401
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.