STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX13855.1Citrate lyase subunit beta / citryl-CoA lyase. (277 aa)    
Predicted Functional Partners:
SDW55163.1
Succinate--mesaconate CoA-transferase.
 
 
 0.955
SDX13991.1
acetyl-CoA synthetase.
   
 0.919
SDX10374.1
acetyl-CoA synthetase.
   
 0.866
SDX18703.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
 
 0.810
SDX12616.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
 
 0.807
SDW64300.1
Allosteric NADP-dependent malic enzyme.
  
 
  0.737
SDW71099.1
triphosphoribosyl-dephospho-CoA synthase.
  
  
 0.721
SDW55019.1
beta-methylmalyl-CoA/L-malyl-CoA lyase.
  
     0.698
SDX13879.1
Cyclopropane-fatty-acyl-phospholipid synthase.
       0.634
SDW33737.1
Malate dehydrogenase (NAD); Belongs to the LDH/MDH superfamily.
  
 
 0.595
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
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