STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX25193.1Amino acid ABC transporter membrane protein 1, PAAT family. (226 aa)    
Predicted Functional Partners:
SDX25169.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.999
SDX25209.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 0.997
SDW64233.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 0.987
SDW64185.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.973
SDX25145.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
  
 
0.871
SDX25128.1
Predicted DNA binding protein, contains HTH domain.
       0.639
SDX25235.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.600
SDW64164.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
  
 
0.462
SDX25276.1
Glutamate dehydrogenase (NADP); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.443
SDX25257.1
Arginase; Belongs to the arginase family.
  
    0.430
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.