STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX25235.14-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (440 aa)    
Predicted Functional Partners:
mfnA
Tyrosine decarboxylase / aspartate 1-decarboxylase; Catalyzes the decarboxylation of L-aspartate to produce beta- alanine; Belongs to the group II decarboxylase family. MfnA subfamily.
  
 0.978
SDX12967.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase.
 0.968
SDW28466.1
Aldehyde dehydrogenase (NAD+).
 
 0.964
SDX13666.1
Aldehyde dehydrogenase (acceptor).
 
 0.964
SDW41958.1
Aldehyde dehydrogenase (NAD+).
 
 0.956
SDW32871.1
Aspartate kinase; Belongs to the aspartokinase family.
 
  
 0.870
SDW66813.1
Sarcosine oxidase subunit beta.
  
 
 0.809
SDW02141.1
Aspartate aminotransferase.
  
 0.774
SDW33737.1
Malate dehydrogenase (NAD); Belongs to the LDH/MDH superfamily.
    
 0.774
SDW41504.1
Alanine-glyoxylate aminotransferase apoenzyme.
  
 0.774
Your Current Organism:
Haloarcula vallismortis
NCBI taxonomy Id: 28442
Other names: ATCC 29715, CGMCC 1.2048, DSM 3756, H. vallismortis, Halobacterium vallismortis, IFO 14741, JCM 8877, NBRC 14741, strain J. F. 54
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