STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODR01053.1Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (577 aa)    
Predicted Functional Partners:
ODR01052.1
4-hydroxyacetophenone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.780
ODR01054.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
ODQ99952.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.765
ODQ98852.1
Steroid delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.765
ODR01055.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.761
ODR00652.1
Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.761
ODQ99873.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.732
BHQ20_23620
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the cytochrome P450 family.
     
 0.721
ODQ97255.1
Steroid C27-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
     
 0.698
ODR01926.1
Steroid C27-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
     
 0.684
Your Current Organism:
Mycobacterium intermedium
NCBI taxonomy Id: 28445
Other names: ATCC 51848, CCUG 37583, CIP 104542, DSM 44049, JCM 13572
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.