STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODQ98778.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (591 aa)    
Predicted Functional Partners:
ODQ99337.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.864
ODQ98030.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.864
ODQ97435.1
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.860
ODR01045.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.687
ODR02420.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.611
ODR02028.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.611
ODR00818.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.611
ODQ98777.1
Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.603
ODR01865.1
Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.600
ODQ98776.1
Citrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
       0.496
Your Current Organism:
Mycobacterium intermedium
NCBI taxonomy Id: 28445
Other names: ATCC 51848, CCUG 37583, CIP 104542, DSM 44049, JCM 13572
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.