STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODQ98277.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (119 aa)    
Predicted Functional Partners:
ODQ98267.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.892
ODR02420.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.834
ODR02028.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.834
ODR00818.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.834
ODQ99937.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.829
ODR00873.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.820
ODR00874.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.688
ODR01745.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.673
ODR00464.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.671
ODR00501.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.631
Your Current Organism:
Mycobacterium intermedium
NCBI taxonomy Id: 28445
Other names: ATCC 51848, CCUG 37583, CIP 104542, DSM 44049, JCM 13572
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.