STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BHQ20_29435enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)    
Predicted Functional Partners:
ODQ94755.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.956
ODQ94710.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.813
ODQ94711.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.735
ODR00025.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.732
ODQ94624.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.704
ODQ94234.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.483
ODR00836.1
Group II intron reverse transcriptase/maturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.422
Your Current Organism:
Mycobacterium intermedium
NCBI taxonomy Id: 28445
Other names: ATCC 51848, CCUG 37583, CIP 104542, DSM 44049, JCM 13572
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.