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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP32570.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)    
Predicted Functional Partners:
AOP32569.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.970
AOP32573.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.930
AOP32567.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.880
AOP33413.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.844
AOP32568.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.840
AOP33415.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.833
AOP34740.1
Peptigoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.833
AOP33416.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.819
AOP32572.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.767
AOP32571.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
Your Current Organism:
Leptospira alstonii
NCBI taxonomy Id: 28452
Other names: ATCC BAA-2439, L. alstonii, Leptospira alstoni, Leptospira alstonii Smythe et al. 2013, Leptospira genomosp. 1, strain 79601
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