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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP32929.1ATPase P; Derived by automated computational analysis using gene prediction method: Protein Homology. (744 aa)    
Predicted Functional Partners:
AOP32928.1
Copper resistance protein CopZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.969
AOP35094.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.852
AOP32927.1
Metal-sensitive transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.807
AOP32926.1
DNA repair photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.484
AOP32930.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.481
AOP32677.1
Pyrimidine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.448
AOP33553.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.448
AOP35269.1
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.443
AOP33656.1
Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.442
AOP36318.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
0.442
Your Current Organism:
Leptospira alstonii
NCBI taxonomy Id: 28452
Other names: ATCC BAA-2439, L. alstonii, Leptospira alstoni, Leptospira alstonii Smythe et al. 2013, Leptospira genomosp. 1, strain 79601
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