STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP35892.1Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)    
Predicted Functional Partners:
AOP33098.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
0.942
AOP33100.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.620
AOP33099.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.610
AOP33101.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.553
AOP33097.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.529
AOP33103.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.501
AOP36410.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.500
AOP36333.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.483
Your Current Organism:
Leptospira alstonii
NCBI taxonomy Id: 28452
Other names: ATCC BAA-2439, L. alstonii, Leptospira alstoni, Leptospira alstonii Smythe et al. 2013, Leptospira genomosp. 1, strain 79601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.