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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP33119.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (196 aa)    
Predicted Functional Partners:
AOP33120.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.788
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
  
 
 0.779
AOP33121.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.733
serB
Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.663
AOP33968.1
Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.642
AOP33117.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.550
AOP33679.1
Nucleotidyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.505
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
    0.485
cdsA
CDP-diglyceride synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.466
AOP34026.1
PLD-like domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.450
Your Current Organism:
Leptospira alstonii
NCBI taxonomy Id: 28452
Other names: ATCC BAA-2439, L. alstonii, Leptospira alstoni, Leptospira alstonii Smythe et al. 2013, Leptospira genomosp. 1, strain 79601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.