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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP33186.1Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (729 aa)    
Predicted Functional Partners:
AOP33185.1
Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.976
ccmE
Cytochrome C biogenesis protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
 
 
 0.948
AOP35134.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.844
AOP33183.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.840
AOP33184.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.840
AOP34249.1
Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.691
AOP32785.1
Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.671
AOP33188.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.636
AOP33189.1
4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.553
A0128_05305
Endonuclease/exonuclease/phosphatase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.480
Your Current Organism:
Leptospira alstonii
NCBI taxonomy Id: 28452
Other names: ATCC BAA-2439, L. alstonii, Leptospira alstoni, Leptospira alstonii Smythe et al. 2013, Leptospira genomosp. 1, strain 79601
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