Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AOP33579.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)    
Predicted Functional Partners:
AOP34210.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.890
AOP34286.1
Cytochrome oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.743
AOP33467.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.588
AOP35122.1
SUF system FeS assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.588
AOP33578.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.535
AOP32861.1
Adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.413
AOP35468.1
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.413
Your Current Organism:
Leptospira alstonii
NCBI taxonomy Id: 28452
Other names: ATCC BAA-2439, L. alstonii, Leptospira alstoni, Leptospira alstonii Smythe et al. 2013, Leptospira genomosp. 1, strain 79601
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