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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP35960.1Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (840 aa)    
Predicted Functional Partners:
AOP33607.1
Cysteine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.980
AOP33606.1
IMP dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.969
AOP33605.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.916
AOP33604.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.884
AOP33474.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.825
AOP33376.1
Circularly permuted ATPgrasp domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.698
AOP32454.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.584
AOP34820.1
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.583
AOP36244.1
Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.583
AOP33608.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.561
Your Current Organism:
Leptospira alstonii
NCBI taxonomy Id: 28452
Other names: ATCC BAA-2439, L. alstonii, Leptospira alstoni, Leptospira alstonii Smythe et al. 2013, Leptospira genomosp. 1, strain 79601
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