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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP33800.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (201 aa)    
Predicted Functional Partners:
AOP33798.1
Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.798
AOP33799.1
Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.767
AOP33542.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.536
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.487
AOP32855.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.458
AOP36084.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.449
AOP36195.1
Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.449
AOP33426.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.444
AOP36472.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.444
AOP33210.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.443
Your Current Organism:
Leptospira alstonii
NCBI taxonomy Id: 28452
Other names: ATCC BAA-2439, L. alstonii, Leptospira alstoni, Leptospira alstonii Smythe et al. 2013, Leptospira genomosp. 1, strain 79601
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